(Keras-Tensorflow) How to crop an output tensor depending on another output's value?



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I am doing a keras application that predicts a group of coordinates from a 3D Image Input. My architecture is the following :



img_input = keras.layers.Input((96,64,64,1))

x = keras.layers.Conv3D(32, (3, 3 ,3), activation='relu', padding='same', name='block1_conv1',trainable=True)(img_input)
x = keras.layers.Conv3D(32, (3, 3 ,3), activation='relu', padding='same', name='block1_conv2',trainable=True)(x)
x = keras.layers.MaxPooling3D((2, 2, 2), name='block1_pool')(x)

# Block 2
x = keras.layers. Conv3D(64, (3, 3 ,3), activation='relu', padding='same', name='block2_conv1',trainable=True)(x)
x = keras.layers.Conv3D(64, (3, 3 ,3), activation='relu', padding='same', name='block2_conv2',trainable=True)(x)
x = keras.layers.MaxPooling3D((2, 2 ,2), name='block2_pool')(x)

# Block 3
x = keras.layers.Conv3D(128, (3, 3 ,3), activation='relu', padding='same', name='block3_conv1',trainable=True)(x)
x = keras.layers.Conv3D(128, (3, 3 , 3), activation='relu', padding='same', name='block3_conv2',trainable=True)(x)
x = keras.layers.MaxPooling3D((2, 2 ,2), name='block3_pool')(x)

# Block 3
x = keras.layers.Conv3D(128, (3, 3 ,3), activation='relu', padding='same', name='block4_conv1',trainable=True)(x)
x = keras.layers.Conv3D(128, (3, 3 , 3), activation='relu', padding='same', name='block4_conv2',trainable=True)(x)
x = keras.layers.MaxPooling3D((2, 2 ,2), name='block4_pool')(x)

x = keras.layers.Flatten(name='flatten')(x)

x = keras.layers.Dense(4096,activation='relu',name="fc7",trainable=True)(x)

x = keras.layers.Dense(4096,activation='relu',name="fc8",trainable=True)(x)

x = keras.layers.Dense(288,activation='linear',name="fc10",trainable=True)(x)


The fact is that,the outputs are not really of size 288, they have all variable lenght, but I zero-padded all of them in order to have a fixed-size output.



In the other hand, I also trained a neural net that predicts the lenght of these outputs giving the same 3D input and it does it pretty well.



What I want is to use the output of this second network to crop the output of my first network . For example ,if my second network predicted a value of 285,the first network will crop the output from 288 to 285.



Is it possible on keras ? Or could you give me and advice of how to do this task(Predict the good coordinates with the correct length)?



Thank you very much










share|improve this question




























    0















    I am doing a keras application that predicts a group of coordinates from a 3D Image Input. My architecture is the following :



    img_input = keras.layers.Input((96,64,64,1))

    x = keras.layers.Conv3D(32, (3, 3 ,3), activation='relu', padding='same', name='block1_conv1',trainable=True)(img_input)
    x = keras.layers.Conv3D(32, (3, 3 ,3), activation='relu', padding='same', name='block1_conv2',trainable=True)(x)
    x = keras.layers.MaxPooling3D((2, 2, 2), name='block1_pool')(x)

    # Block 2
    x = keras.layers. Conv3D(64, (3, 3 ,3), activation='relu', padding='same', name='block2_conv1',trainable=True)(x)
    x = keras.layers.Conv3D(64, (3, 3 ,3), activation='relu', padding='same', name='block2_conv2',trainable=True)(x)
    x = keras.layers.MaxPooling3D((2, 2 ,2), name='block2_pool')(x)

    # Block 3
    x = keras.layers.Conv3D(128, (3, 3 ,3), activation='relu', padding='same', name='block3_conv1',trainable=True)(x)
    x = keras.layers.Conv3D(128, (3, 3 , 3), activation='relu', padding='same', name='block3_conv2',trainable=True)(x)
    x = keras.layers.MaxPooling3D((2, 2 ,2), name='block3_pool')(x)

    # Block 3
    x = keras.layers.Conv3D(128, (3, 3 ,3), activation='relu', padding='same', name='block4_conv1',trainable=True)(x)
    x = keras.layers.Conv3D(128, (3, 3 , 3), activation='relu', padding='same', name='block4_conv2',trainable=True)(x)
    x = keras.layers.MaxPooling3D((2, 2 ,2), name='block4_pool')(x)

    x = keras.layers.Flatten(name='flatten')(x)

    x = keras.layers.Dense(4096,activation='relu',name="fc7",trainable=True)(x)

    x = keras.layers.Dense(4096,activation='relu',name="fc8",trainable=True)(x)

    x = keras.layers.Dense(288,activation='linear',name="fc10",trainable=True)(x)


    The fact is that,the outputs are not really of size 288, they have all variable lenght, but I zero-padded all of them in order to have a fixed-size output.



    In the other hand, I also trained a neural net that predicts the lenght of these outputs giving the same 3D input and it does it pretty well.



    What I want is to use the output of this second network to crop the output of my first network . For example ,if my second network predicted a value of 285,the first network will crop the output from 288 to 285.



    Is it possible on keras ? Or could you give me and advice of how to do this task(Predict the good coordinates with the correct length)?



    Thank you very much










    share|improve this question
























      0












      0








      0








      I am doing a keras application that predicts a group of coordinates from a 3D Image Input. My architecture is the following :



      img_input = keras.layers.Input((96,64,64,1))

      x = keras.layers.Conv3D(32, (3, 3 ,3), activation='relu', padding='same', name='block1_conv1',trainable=True)(img_input)
      x = keras.layers.Conv3D(32, (3, 3 ,3), activation='relu', padding='same', name='block1_conv2',trainable=True)(x)
      x = keras.layers.MaxPooling3D((2, 2, 2), name='block1_pool')(x)

      # Block 2
      x = keras.layers. Conv3D(64, (3, 3 ,3), activation='relu', padding='same', name='block2_conv1',trainable=True)(x)
      x = keras.layers.Conv3D(64, (3, 3 ,3), activation='relu', padding='same', name='block2_conv2',trainable=True)(x)
      x = keras.layers.MaxPooling3D((2, 2 ,2), name='block2_pool')(x)

      # Block 3
      x = keras.layers.Conv3D(128, (3, 3 ,3), activation='relu', padding='same', name='block3_conv1',trainable=True)(x)
      x = keras.layers.Conv3D(128, (3, 3 , 3), activation='relu', padding='same', name='block3_conv2',trainable=True)(x)
      x = keras.layers.MaxPooling3D((2, 2 ,2), name='block3_pool')(x)

      # Block 3
      x = keras.layers.Conv3D(128, (3, 3 ,3), activation='relu', padding='same', name='block4_conv1',trainable=True)(x)
      x = keras.layers.Conv3D(128, (3, 3 , 3), activation='relu', padding='same', name='block4_conv2',trainable=True)(x)
      x = keras.layers.MaxPooling3D((2, 2 ,2), name='block4_pool')(x)

      x = keras.layers.Flatten(name='flatten')(x)

      x = keras.layers.Dense(4096,activation='relu',name="fc7",trainable=True)(x)

      x = keras.layers.Dense(4096,activation='relu',name="fc8",trainable=True)(x)

      x = keras.layers.Dense(288,activation='linear',name="fc10",trainable=True)(x)


      The fact is that,the outputs are not really of size 288, they have all variable lenght, but I zero-padded all of them in order to have a fixed-size output.



      In the other hand, I also trained a neural net that predicts the lenght of these outputs giving the same 3D input and it does it pretty well.



      What I want is to use the output of this second network to crop the output of my first network . For example ,if my second network predicted a value of 285,the first network will crop the output from 288 to 285.



      Is it possible on keras ? Or could you give me and advice of how to do this task(Predict the good coordinates with the correct length)?



      Thank you very much










      share|improve this question














      I am doing a keras application that predicts a group of coordinates from a 3D Image Input. My architecture is the following :



      img_input = keras.layers.Input((96,64,64,1))

      x = keras.layers.Conv3D(32, (3, 3 ,3), activation='relu', padding='same', name='block1_conv1',trainable=True)(img_input)
      x = keras.layers.Conv3D(32, (3, 3 ,3), activation='relu', padding='same', name='block1_conv2',trainable=True)(x)
      x = keras.layers.MaxPooling3D((2, 2, 2), name='block1_pool')(x)

      # Block 2
      x = keras.layers. Conv3D(64, (3, 3 ,3), activation='relu', padding='same', name='block2_conv1',trainable=True)(x)
      x = keras.layers.Conv3D(64, (3, 3 ,3), activation='relu', padding='same', name='block2_conv2',trainable=True)(x)
      x = keras.layers.MaxPooling3D((2, 2 ,2), name='block2_pool')(x)

      # Block 3
      x = keras.layers.Conv3D(128, (3, 3 ,3), activation='relu', padding='same', name='block3_conv1',trainable=True)(x)
      x = keras.layers.Conv3D(128, (3, 3 , 3), activation='relu', padding='same', name='block3_conv2',trainable=True)(x)
      x = keras.layers.MaxPooling3D((2, 2 ,2), name='block3_pool')(x)

      # Block 3
      x = keras.layers.Conv3D(128, (3, 3 ,3), activation='relu', padding='same', name='block4_conv1',trainable=True)(x)
      x = keras.layers.Conv3D(128, (3, 3 , 3), activation='relu', padding='same', name='block4_conv2',trainable=True)(x)
      x = keras.layers.MaxPooling3D((2, 2 ,2), name='block4_pool')(x)

      x = keras.layers.Flatten(name='flatten')(x)

      x = keras.layers.Dense(4096,activation='relu',name="fc7",trainable=True)(x)

      x = keras.layers.Dense(4096,activation='relu',name="fc8",trainable=True)(x)

      x = keras.layers.Dense(288,activation='linear',name="fc10",trainable=True)(x)


      The fact is that,the outputs are not really of size 288, they have all variable lenght, but I zero-padded all of them in order to have a fixed-size output.



      In the other hand, I also trained a neural net that predicts the lenght of these outputs giving the same 3D input and it does it pretty well.



      What I want is to use the output of this second network to crop the output of my first network . For example ,if my second network predicted a value of 285,the first network will crop the output from 288 to 285.



      Is it possible on keras ? Or could you give me and advice of how to do this task(Predict the good coordinates with the correct length)?



      Thank you very much







      python-3.x tensorflow keras conv-neural-network crop






      share|improve this question













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      asked Nov 16 '18 at 12:44









      MateoMateo

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